CDS

Accession Number TCMCG057C35980
gbkey CDS
Protein Id XP_018438951.1
Location join(43031965..43031997,43032081..43032263,43032352..43032441,43032526..43032594,43032694..43032837,43032912..43033098,43033201..43033301,43033409..43033540,43033635..43033763,43033853..43033954,43034055..43034486)
Gene LOC108811397
GeneID 108811397
Organism Raphanus sativus

Protein

Length 533aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018583449.1
Definition PREDICTED: small RNA degrading nuclease 3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description F-box protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10268        [VIEW IN KEGG]
ko:K10273        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCATAAACTAGCCACTGCTGAGAAGAAAGTGCTGGTAGAGCTGGTGAAGCTAGTGCAGAAGCAAGGTTTAGAAGGCGACAACGGAGGATGGAAAGACTTTCTAAACTCTTACGATAAGAGATTCGGATCGTCTCTCAGTGATCCTTCGAGACGCTCCAATGATGTATTGGTCGCTTTTCTTTCCACTTTCAAAAACAAGGAAGACGTGCAGCTATTGGCTAGGGTTCTTCAGTGTGATGCTAATCGTAACTTGATTGAGAAATTCAAGCAAGAATCTCGTGATAAAGAGACTCCTGAGCAGAGGCTAGTTCGAATGACTATTACTCATCCTAGGTTCCCAATCTACTATGCTTTCCCTTCCCATGCCGAGGATTGGTTTGTAACTAAGACCGGCAAGAAGCAGTCAAAAGTGATGAAGTCAACCAGAATGCTTGCTATTGATTGTGAGATGGTTACCTGTGAAGATGGCAGTGAAGCTGTTGTCAGGATTGGCGCCGTTGACCGTGATTTAAAGGTGGTACTTGACAAATTTGTGAAACCGAGCCTACCGGTTGTTGACTATAAGACAGACATTACTGGAGTTACTGCTGAGGATCTTGAGAAAGCCACTCTATCTGTTGCTGATATTCAGAAAAAAATGCAGAGGTTTCTTTCTAAGGGAACAATTTTAGTAGGTCACGGTTTGCATAATGATCTTCAAGTGTTGAAGGTAGATCATGCCAGAGTAATCGATACTTCGCTTGTATTCAACTATTCTGGTGCAAACAATTCTCGAACACCTTCTCTGTTAAATCTTTGCAAGTCTGTTTTGGATGAAGAACTGCGAATGGTGGGTGCTGCTCACAATTGCGTTCATGACGCTGCCGCTGCTATGAAGCTTGTACTTGCTGTTGTGGAAAAGGGAGTAGAGACCTCGATTCCACAAACTGAAGAAATGATGGAGGTTGAGAAGACAAAGCATGAGGCTAAGAAGGCAAGTCTCTATCTTCATAAGATCCCTCACAATTTTCCTTCTCGAGAGTTAAAAGGAGTTGTTACGGGAGATTTCAAAGTCGAGGTTAAGCCACCAAAGAAGGTAGGAGGTTATTATAGCGCAGAAGTTGAGTTTAGTAGTCAAGAGGAAGCAAATCAAGCATTTGATAACGTTGATGGAGATATCGTTAAGGATACGATGGGTTTGTCACAGAAAATGGTTGAGTTTAAGCTGAGTTCTGGATCAGTATCTAGACTATACGTTCGTAAAAATGTTCAAGACGGTGAAGTCTCTGATACCAAGAAGAGAAGCAAAACAGAGGAGAACAATGCGAGTTCTAAGAGACAGAAGAGGGAGAATGATTCTGATGAGATCAGAGAAGGGAACGTAAACCATGGCAGCAGCCAAGGGAGCAGCATCAGTGAAAATCATATAAAGGAAATTGAAGAACTGAAGGAGAAACTCAAAGCTACGTTTGAGGAAAATGAAGAACAGAAGGAGAAACTAAAAGCTACGGTTAAGGAAAATGAAGAACTGAAGGAAAAACTAAAAGCTAAGGAGCGTGAGGTTGAGGCTCAGGATAAGATGATAACTACCCTCAAAAAGAAACTGAAGAAAAAGTGA
Protein:  
MEHKLATAEKKVLVELVKLVQKQGLEGDNGGWKDFLNSYDKRFGSSLSDPSRRSNDVLVAFLSTFKNKEDVQLLARVLQCDANRNLIEKFKQESRDKETPEQRLVRMTITHPRFPIYYAFPSHAEDWFVTKTGKKQSKVMKSTRMLAIDCEMVTCEDGSEAVVRIGAVDRDLKVVLDKFVKPSLPVVDYKTDITGVTAEDLEKATLSVADIQKKMQRFLSKGTILVGHGLHNDLQVLKVDHARVIDTSLVFNYSGANNSRTPSLLNLCKSVLDEELRMVGAAHNCVHDAAAAMKLVLAVVEKGVETSIPQTEEMMEVEKTKHEAKKASLYLHKIPHNFPSRELKGVVTGDFKVEVKPPKKVGGYYSAEVEFSSQEEANQAFDNVDGDIVKDTMGLSQKMVEFKLSSGSVSRLYVRKNVQDGEVSDTKKRSKTEENNASSKRQKRENDSDEIREGNVNHGSSQGSSISENHIKEIEELKEKLKATFEENEEQKEKLKATVKENEELKEKLKAKEREVEAQDKMITTLKKKLKKK